WS-VLAM Applications

University of Amsterdam - UvA
Faculty of Science

Applications developed with WS-VLAM

A list of sample workflows of scientific experiments is presented. These workflows were composed and executed with the tools provided in WS-VLAM.

Fast elaboration of molecular models using Grid workflows [Poster]
       at the TU Munchen and PaderBorn, Germany
       Developers: Ekaterian Elts et al. (TU Munchen)
       Details can be found in the following publications:

      "Fast elaboration of molecular models using Grid workflows"
       Joint Session of the ProcessNet Working Party Molecular Modelling and
      Simulation for Process and Product Design and the EFCE Working Party on
      Thermodynamics and Transport Properties,
       Wurzburg, Germany, March 22-23, 2010. [Poster]

Omnimatch workflow
Developers: Theodoor Peter van der Krift , (Bio, UU),

A wave propagation model of blood flow in large vessels [movie]
Developers: C. Leguy (WTB, TUE)
Details can be found in the following publications:

       "Expert consensus document on arterial stiffness:
       methodological issues and clinical applications."
       Eur Heart J, vol. 27, pp. 2588 - 2605, Nov 2006.

      "A wave propagation model of blood flow in large vessels
       using an approximate velocity profile function"
       J. Fluid Mech., vol. 580, p. 145-168, 2007.

SigWin-Detector Tool for Gene Expression Analysis

       Developers: Marcia A. Inda, (IBU, UvA),
       Web page:SigWin Home page
       Details can be found in the publication:"Interactive Workflow in a Virtual
       Laboratory for e-Bioscience: the SigWin-Detector Tool for Gene Expression
       Analysis" 2nd IEEE Intl. Conference on e-science and Grid Computing,
       Amsterdam, The Netherlands, Dec. 4 -6, 2006 ieee web site

R Evaluation (Bio-diversity)
       Developers: Hamzeh Sheikhasan, Wibisono Adianto (UvA)
       Details can be found in M.Sc. thesis entitled "A Comparison of Interpolation
       Techniques for Spatial Data Prediction"
       Hamzeh Sheikhasan, June 2006

R Prediction (Bio-diversity)
       Developers: Hamzeh Sheikhasan, Wibisono Adianto (UvA)
       Details can be found in M.Sc. thesis entitled "A Comparison of Interpolation
       Techniques for Spatial Data Prediction"
       Hamzeh Sheikhasan, June 2006

Micro Array Test(Bio-informatics)

Developers: Han Rauwerda (IBU, UvA), Frans Vester, Wibisono Adianto
(UvA)

Image Rendering with Web services

Developers: Jerry N Yang, Wibisono Adianto (UvA)

Details can be found in M.Sc. thesis entitled "A Service-Oriented
Visualization of Medical Data" Jerry N Yang, August 2006

University of Amsterdam UvA
Science Park Amsterdam 904 1098 XH
Amsterdam, The Netherlands

Tel: +31(0)20 525 7514
Fax: +31 (0)20 525 7490

Last update:
March 2014