.. meta-omics documentation master file, created by sphinx-quickstart on Sat Feb 19 15:16:17 2022. Welcome to my Meta-Omics pages ! ================================ On this site, you'll find material from my Meta-Omics courses given at University of Amsterdam. The idea is that this page will grow. So far, there is a 10-part seminar series on metagenomics with a practical part and a seminar on metabarcoding. Videos of the seminars are available. Check the individual sections on how to access them. .. toctree:: :maxdepth: 1 :hidden: :caption: Courses: :name: courses metagenomics_00.rst metabc_00.rst .. toctree:: :maxdepth: 1 :hidden: :caption: Metagenomics 101 lectures: :name: lectures 01_overview.rst 02_rawQC.rst 03_mapping.rst 04_taxonomy1.rst 05_assembly.rst 06_annotations.rst 07_functionalDBs.rst 08_funcProfiles.rst 09_binning.rst 10_catalogues.rst XX_metatranscriptomics.rst .. toctree:: :maxdepth: 1 :hidden: :caption: Metagenomics 101 practicals: :name: practicals 01_testrun.rst 02_preprun.rst 03_runBWA.rst 04_runTax.rst 05_runAss.rst 06_runAnno.rst 07_checkAnno.rst 08_calcFunc.rst 09_runBinning.rst .. toctree:: :maxdepth: 1 :hidden: :caption: Metabarcoding seminar: :name: metabarcoding metabc_2024.rst metabc_01.rst metabc_02.rst .. * :ref:`genindex` .. * :ref:`modindex` .. * :ref:`search`